Chlorate and Perchlorate Residues in Dietary Supplements: Why Testing Matters

Chlorates and perchlorates are chlorine-based oxyanions that have emerged as contaminants of concern in the food and dietary supplement industries. These compounds are highly soluble in water and persistent in the environment, making them difficult to eliminate once introduced into the supply chain.
Where Are They Found?
Chlorate and perchlorate residues can enter dietary supplements through several pathways:
- Water used in processing: Chlorinated water used for rinsing raw materials or cleaning equipment can leave behind residues.
- Agricultural inputs: Fertilizers containing ammonium perchlorate or legacy herbicides may contaminate plant-based ingredients.
- Disinfectants and sanitizers: Use of chlorine-based disinfectants in manufacturing facilities can lead to by-product formation.
- Food contact materials: Migration from packaging or processing equipment treated with chlorinated compounds is another potential source.
Health Risks and Regulatory Concerns
Both chlorates and perchlorates are known to interfere with iodine uptake in the thyroid gland, posing a risk to endocrine health. Vulnerable populations—such as infants, pregnant women, and individuals with thyroid disorders—are particularly at risk. Chronic exposure may lead to hypothyroidism and developmental issues.1
Currently, there are no specific U.S. regulatory limits for chlorate and perchlorate in dietary supplements, although both chemicals are recognized for their potential health risks—especially their impact on thyroid function. While perchlorate is regulated in drinking water and addressed in some FDA guidance related to food packaging, and chlorate is monitored as a disinfectant byproduct, these controls don’t directly extend to supplements. Under the Dietary Supplement Health and Education Act (DSHEA), supplement manufacturers are responsible for product safety and quality through Current Good Manufacturing Practices (CGMPs), but testing for contaminants like chlorate and perchlorate is not explicitly mandated unless a known risk is present.2
Why Testing Is Essential
Even with the evolving regulatory framework around chlorate and perchlorate testing the potential health implications and regulatory scrutiny drives routine testing for chlorate and perchlorate residues is critical for dietary supplement manufacturers. Testing methods such as LC-MS/MS (liquid chromatography–mass spectrometry) offer sensitive and reliable detection and quantification of these contaminants at trace levels.
Regular monitoring plays a critical role in helping manufacturers safeguard both consumer health and brand integrity. By routinely testing and analyzing their products, companies can detect potential contaminants early, reducing the risk of harmful exposure to consumers. This proactive approach not only enhances public trust but also enables manufacturers to pinpoint sources of contamination and refine their process controls, ultimately leading to safer, higher-quality products.
What Manufacturers Need to Know
- Review your supply chain: Assess raw material sources, especially plant-based ingredients, for potential contamination.
- Audit water and sanitation practices: Use non-chlorinated water where possible and evaluate cleaning agents for by-product risks.
- Test routinely: Incorporate chlorate and perchlorate testing into your quality assurance program.
- Stay informed: Monitor evolving regulations and scientific findings to remain compliant and proactive.
Conclusion
As scrutiny around food safety and environmental contaminants intensifies, dietary supplement manufacturers must take a proactive approach to managing chlorate and perchlorate residues. These compounds may be invisible to the naked eye, but their impact on consumer health and regulatory compliance is anything but. Through vigilant sourcing, thoughtful processing practices, and robust testing protocols, companies can protect their consumers, their brand, and the integrity of their products. Staying ahead of emerging contaminants isn't just smart—it's essential in today's competitive and compliance-driven marketplace.
Start the Conversation
Have additional questions? Ready to get started? We can help.